| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00049 |
1 |
154 |
Not Confirmed |
Likely |
Rare |
African |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
G |
0.95 |
T |
0.05 |
CCCCTCTCTGAGCTTGAATTTTCTACCTGCTGAAATGGGAAAAGGAATGTTACCTTCCTT*CCTGACTCAAGGGTGGCTGTGAAGCTCAAAGTAGACTGGGATGTGGCCGTGCTTGGTAAA |
| CHAK00050 |
1 |
723 |
Not Confirmed |
Likely |
Rare |
African |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
C |
0.95 |
T |
0.05 |
AGCTCCCCAGGTCCAGGGCTCGGGCCATCCGCGCTGTCCCTTCCGCGGGCTCTTGCTGTT*TTCGCCAGGAGGCTTTGCACTCCGGGCCGCATGGGTCCTGGATAAGGACCTCAAGAGGTT |
| CHAK00051 |
1 |
981 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
G |
0.95 |
A |
0.05 |
CCCCCATCCCAACTCCAGCCCCAAAGGAAGCAATGCGCGCGTCCGAGAGCAGGAGCGCGC*TGGCTGAGGAAAGAAAGGGAAGGCAACCGGGCAGCCCAGGCCCCGCCCCGCCGCTCCCCC |
| CHAK00052 |
1 |
1197 |
Not Confirmed |
Likely |
Rare |
U.S. White |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
C |
0.95 |
T |
0.05 |
TTCTCACTGCAGCTGGGCTTGGACTTCGGAGTTTTGCCATTGCCAGTGGGACGTCTGAGA*TTTCTCCTTCAAGTACTTGGCAGATCACTCTCTTAGCAGGTAGGTGCCGCAGACCCTGCG |
| CHAK00053 |
2 |
101 |
Not Confirmed |
Certain |
Rare |
African |
Coding |
Leu |
Leu |
Synonymous |
3 |
CTA |
CTC |
D43639 |
A |
0.95 |
C |
0.05 |
CGCAGCCGGGATGAAGCTGGTTTCCGTCGCCCTGATGTACCTGGGTTCGCTCGCCTTCCT*GGCGCTGACACCGCTCGGTTGGATGTCGCGTCGGAGTTTCGAAAGAAGTGAGTCCGGGCA |
| CHAK00054 |
3 |
81 |
Not Confirmed |
Likely |
Low |
African |
Coding |
Ser |
Arg |
Nonsynonymous |
3 |
AGC |
AGG |
D43639 |
C |
0.95 |
G |
0.05 |
GTTTTCCAGGTGGAATAAGTGGGCTCTGAGTCGTGGGAAGAGGGAACTGCGGATGTCCAG*AGCTACCCCACCGGGCTCGCTGACGTGAAGGCCGGGCCTGCCCAGACCCTTATTCGGCCC |
| CHAK00055 |
4 |
388 |
Not Confirmed |
Likely |
Rare |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
G |
0.95 |
C |
0.05 |
CACTTTCTTTAGGATTTAGGCGCCCATGGTACAAGGAATAGTCGCGCAAGCATCCCGCTG*TGCCTCCCGGGACGAAGGACTTCCCGAGCGGTGTGGGGACCGGGCTCTGACAGCCCTGCG |
| CHAK00056 |
4 |
536 |
Not Confirmed |
Likely |
Rare |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
T |
0.95 |
G |
0.05 |
CGGCGGCGAGCTCTGGCTTTGCAAGGGCCCCTCCTTCTGGGGGCTTCGCTTCCTTAGCCT*GCTCAGGTGCAAGTGCCCCAGGGGGCGGGGTGCAGAAGAATCCGAGTGTTTGCCAGGCTT |
| CHAK00057 |
4 |
918 |
Not Confirmed |
Certain |
Low |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
A |
0.9 |
G |
0.1 |
ATATTGTATTAAGGGCATTTTAAAAGCAATTATATTGTCCTCCCCTATTTTAAGACGTGA*TGTCTCAGCGAGGTGTAAAGTTGTTCGCCGCGTGGAATGTGAGTGTGTTTGTGTGCATGA |
| CHAK00058 |
4 |
1033 |
Not Confirmed |
Likely |
Rare |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
T |
0.95 |
C |
0.05 |
GCATGAAAGAGAAAGACTGATTACCTCCTGTGTGGAAGAAGGAAACACCGAGTCTCTGTA*AATCTATTTACATAAAATGGGTGATATGCGAACAGCAAACCAATAAACTGTCTCAATGCT |
| CHAK00059 |
4 |
1292 |
Not Confirmed |
Likely |
Rare |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
A |
0.95 |
G |
0.05 |
TGAGCTGTCACGAGCTCTGTTCTCTGTGTGGGGCGCGCAGAACACGTGTCCTGGGTGCGA*TCAGGGCTTCGCGGAGACGCCCGAGGTCACCGCCTGGCGTGGCGGCCGGCGGGGGGTGGG |
| CHAK00060 |
4 |
1389 |
Not Confirmed |
Likely |
Rare |
U.S. White |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D43639 |
T |
0.95 |
C |
0.05 |
GCGTGGCGGCCGGCGGGGGGTGGGTAGGGGGAGCCCTAGTGGGTTGGCGAGCCTGGACTC*CGGGTTGCGCAACGGAGTCCTAGATTTATAGGGTTGCTCACAGAACCCGGCGCGAAAGCG |
