| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00042 |
1 |
44 |
Confirmed |
Likely |
N/A |
African |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
X72861 |
A |
N/A |
G |
N/A |
TCCAATTCGGCTCCAGAGGCCCCTCCAGACTATAGGCAGCTGCCCCTTTAAGCGTCGCTACTCCTCCCCC*AGAGCGGTGGCACCGAGGGAGTTGGGGTGGGGGGAGGCTGAGCGCTCTGGCTGGGACAGCTAGAGAAGAT |
| CHAK00043 |
1 |
416 |
Confirmed |
Likely |
Medium |
Both |
Coding |
Trp |
Arg |
Nonsynonymous |
1 |
TGG |
CGG |
X72861 |
T |
0.85 |
C |
0.15 |
CGGGGCCCTGCTGGCGCTGGCGGTGCTGGCCACCGTGGGAGGCAACCTGCTGGTCATCGTGGCCATCGCC*GGACTCCGAGACTCCAGACCATGACCAACGTGTTCGTGACTTCGCTGGCCGCAGCCGACCTGGTGATGGG |
| CHAK00044 |
1 |
1020 |
Confirmed |
Likely |
Rare |
African |
Coding |
Thr |
Met |
Nonsynonymous |
2 |
ACG |
ATG |
X72861 |
C |
0.95 |
T |
0.05 |
CTGGGCCGCTTTCCGCCCGAGGAGTCTCCGCCGGCGCCGTCGCGCTCTCTGGCCCCGGCCCCGGTGGGGA*GTGCGCTCCGCCCGAAGGGGTGCCCGCCTGCGGCCGGCGGCCCGCGCGCCTCCTGCCTCTCCGGGAACAC |
| CHAK00045 |
1 |
1354 |
Confirmed |
Likely |
Low |
African |
Coding |
Arg |
Arg |
Synonymous |
3 |
CGC |
CGT |
X72861 |
C |
0.9 |
T |
0.1 |
GCAGCGCCTTCCGCCGTCTTCTGTGCCGCTGCGGCCGTCGCCTGCCTCCGGAGCCCTGCGCCGCCGCCCG*CCGGCCCTCTTCCCCTCGGGCGTTCCTGCGGCCCGGAGCAGCCCAGCGCAGCCCAGGCTTTGCCAACGGC |
| CHAK00046 |
1 |
1445 |
Confirmed |
Likely |
Low |
U.S. White |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
X72861 |
G |
0.9 |
T |
0.1 |
CGTTCCTGCGGCCCGGAGCAGCCCAGCGCAGCCCAGGCTTTGCCAACGGCTCGACGGGTAGGTAACCGGG*CAGAGGGACCGGCGGCTCAGGGTCGGGAAGCATGCGATGTGTCCGTGGGTCAAC |
| CHAK00047 |
2 |
301 |
Confirmed |
Likely |
Rare |
U.S. White |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
X72861 |
G |
0.95 |
C |
0.05 |
CTCTCTGTCTGAGAGATGTTTTCTAAACCCCAGCCTTGAACTTCACTCCTCCCTCAGTGGTAGTGTCCAG*TGCCGTGGAGCAGCAGGCTGGCTTTGGTAGGGGCACCCATCACCCGGCTTGCCTGTGCAGTCAGTGAGTG |
| CHAK00048 |
2 |
408 |
Confirmed |
Certain |
Medium |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
X72861 |
C |
0.8 |
T |
0.2 |
CCATCACCCGGCTTGCCTGTGCAGTCAGTGAGTGCTTAGGGCAAAGAGAGCTCCCCTGGTTCCATTCCTT*TGCCACCCAAACCCTGATGAGACCTTAGTGTTCTCCAGGCTCTGTGGCCCAGGCTGAGAGCAGCAGGGTA |
