| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00175 |
N/A |
13 |
Not Confirmed |
Likely |
Medium |
U.S. White |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
J02698 |
T |
0.2 |
A |
0.8 |
AGGGGGCTGTGTCCAAGTCCATGCATGGGAAACTTGACTGGGACACCGAGC*CACACAGAGCAGGATCTCAGTCCCCCCCACCAGAGTGGGCGTGACCACAGGAACAGCCGC |
| CHAK00176 |
N/A |
126 |
Not Confirmed |
Likely |
Rare |
African |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
J02698 |
C |
0.95 |
T |
0.05 |
ACAGCCGCCTCCAGTCAGCCTGCCACATGACACCCCCTCAATGTTCCAGGTCTCTGGACA*TATGGGCACACGACTCCTCCCAGCTCTGTTTCTTGTCCTCCTGGTATTGGGATTTGGTGA |
| CHAK00177 |
N/A |
472 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Glu |
Lys |
Nonsynonymous |
1 |
GAG |
AAG |
J02698 |
G |
0.95 |
A |
0.05 |
GTGAAGGAATCTCTCTCCAGTTACTGGGAGTCAGCAAAGACAGCCGCCCAGAACCTGTAC*AGAAGACATACCTGCCCGCTGTAGATGAGAAACTCAGGTAGCACCTGCCCCTGGAGAAAT |
| CHAK00178 |
N/A |
553 |
Not Confirmed |
Likely |
Rare |
African |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
J02698 |
G |
0.95 |
A |
0.05 |
GTAGATGAGAAACTCAGGTAGCACCTGCCCCTGGAGAAATGGGGTCTGGCCCATACCACC*ACTGCATCCAGGACCCAGAAGTTCAGGCCCCAGCCCTCCTCCCTCAGACCCAGGAGTCCA |
| CHAK00179 |
N/A |
725 |
Not Confirmed |
Likely |
High |
U.S. White |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
J02698 |
T |
0.3 |
C |
0.7 |
TCCCTCAGACCCAGGAGTCCAGGCCCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGG*CCCCAGACCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCCAGCCCCTCCTCCCTCTAAC |
| CHAK00180 |
N/A |
804 |
Not Confirmed |
Likely |
Rare |
African |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
J02698 |
A |
0.95 |
T |
0.05 |
CAGACCCAGGAGTCCAGGCCCCCAGCCCCTCCTCCCTCTAACCATCTGTGCTTTCTCCCC*GGGACTTGTACAGCAAAAGCACAGCAGCCATGAGCACTTAGACAGGCATTTTTACTGACC |
| CHAK00181 |
N/A |
819 |
Confirmed |
Likely |
High |
African |
Coding |
Lys |
Gln |
Nonsynonymous |
1 |
AAA |
CAA |
J02698 |
A |
0.7 |
C |
0.3 |
AGGCCCCCAGCCCCTCCTCCCTCTAACCATCTGTGCTTTCTCCCCAGGGACTTGTACAGC*AAAGCACAGCAGCCATGAGCACTTAGACAGGCATTTTTACTGACCAAGTTCTTTCTGTGC |
| CHAK00182 |
N/A |
1084 |
Not Confirmed |
Likely |
Rare |
Both |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
J02698 |
G |
0.95 |
T |
0.05 |
AATAAAAAATACAATTCAAGTTGCTTCTCATGGATGGCACTGCTTTTCTGAGGACTCAAG*GCCAAGATGGAGGGGCTGACTCAGTCCAGCCAACATTTAATGAGCACCTACTTTATGTAT |
