| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00255 |
1 |
114 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Thr |
Ser |
Nonsynonymous |
1 |
ACT |
TCT |
U52112 |
A |
0.95 |
T |
0.05 |
ACATCACCTCCAGGCCCTCAGAACACCTGCCCCAGCCCCACCATGCTCATGGCGTCCACC*CTTCCGGTAAGGCTTGCCCCTCCATGAGTCCGGTGGGCAGAGTGGGTTTGACGATTCAGG |
| CHAK00256 |
2 |
109 |
Not Confirmed |
Certain |
Rare |
African |
Coding |
Leu |
Leu |
Synonymous |
3 |
CTG |
CTA |
U52112 |
G |
0.95 |
A |
0.05 |
TCTGCCCAGCCTGCCCAGCAACAGCAGCCAGGAGAGGCCACTGGACACCCGGGACCCGCT*CTAGCCCGGGCGGAGCTGGCGCTGCTCTCCATAGTCTTTGTGGCTGTGGCCCTGAGCAAT |
| CHAK00257 |
2 |
129 |
Not Confirmed |
Likely |
Low |
African |
Coding |
Ala |
Val |
Nonsynonymous |
2 |
GCG |
GTG |
U52112 |
C |
0.9 |
T |
0.1 |
ACAGCAGCCAGGAGAGGCCACTGGACACCCGGGACCCGCTGCTAGCCCGGGCGGAGCTGG*GCTGCTCTCCATAGTCTTTGTGGCTGTGGCCCTGAGCAATGGCCTGGTGCTGGCGGCCCT |
| CHAK00258 |
2 |
184 |
Not Confirmed |
Likely |
Low |
African |
Coding |
Ala |
Ala |
Synonymous |
3 |
GCG |
GCT |
U52112 |
G |
0.9 |
T |
0.1 |
GCTGGCGCTGCTCTCCATAGTCTTTGTGGCTGTGGCCCTGAGCAATGGCCTGGTGCTGGC*GCCCTAGCTCGGCGGGGCCGGCGGGGCCACTGGGCACCCATACACGTCTTCATTGGCCAC |
| CHAK00259 |
2 |
444 |
Not Confirmed |
Certain |
Medium |
African |
Coding |
Ala |
Val |
Nonsynonymous |
2 |
GCG |
GTG |
U52112 |
C |
0.85 |
T |
0.15 |
CCTACATGATCCTGGCCATGACGCTGGACCGCCACCGTGCCATCTGCCGTCCCATGCTGG*GTACCGCCATGGAAGTGGGGCTCACTGGAACCGGCCGGTGCTAGTGGCTTGGGCCTTCTC |
| CHAK00260 |
3 |
46 |
Confirmed |
Likely |
High |
U.S. White |
Coding |
Leu |
Leu |
Synonymous |
3 |
CTA |
CTG |
U52112 |
A |
0.55 |
G |
0.45 |
CCACCAGCCATCCTGAACCCAACCTAGATCCTCCACCTCCACAGGGGCGCCCTTTGTGCT*CTCATGTTGCTGGCCAGCCTCAACAGCTGCACCAACCCCTGGATCTATGCATCTTTCAGC |
| CHAK00261 |
3 |
112 |
Not Confirmed |
Certain |
Medium |
Both |
Coding |
Ser |
Ser |
Synonymous |
3 |
AGC |
AGT |
U52112 |
C |
0.9 |
T |
0.1 |
GTTGCTGGCCAGCCTCAACAGCTGCACCAACCCCTGGATCTATGCATCTTTCAGCAGCAG*GTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCGGGGACGCACCCCACCCAGCCTG |
| CHAK00262 |
3 |
232 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Ser |
Ser |
Synonymous |
3 |
TCG |
TCA |
U52112 |
G |
0.95 |
A |
0.05 |
GGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATC*TGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGCCTTCCTGGG |
| CHAK00263 |
3 |
252 |
Not Confirmed |
Likely |
Rare |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
U52112 |
T |
0.95 |
C |
0.05 |
GCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTC*TGCCTCTAGAGGCTTTGAGAAGCTCAGCTGCCTTCCTGGGGCTGGTCCTGGGAGCCACTG |