| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00312 |
10 |
33 |
Confirmed |
Likely |
High |
African |
Coding |
Val |
Leu |
Nonsynonymous |
1 |
GTT |
CTT |
Z30644 |
G |
0.6 |
C |
0.4 |
AGGTTCAGCTCCAAACTGCTGGCCACCAGCAAGCCTGTGTACTCCGCTCTGGCCACCTTG*TTCTCGCCTCCATCACCTACCCACCCAGCGCCGGCCGCTTCCTAGCTTCTCGGCTGTCCA |
| CHAK00313 |
13 |
12 |
Not Confirmed |
Likely |
Medium |
Both |
Coding |
Ile |
Ile |
Synonymous |
3 |
ATC |
ATT |
Z30644 |
C |
0.85 |
T |
0.15 |
CCATGCCTGCCGGGTACTTCATGCCCATCTTTGTCTATGGAGCTGCTAT*GGGCGCCTCTTTGGGGAGACTCTCTCTTTTATCTTCCCTGAGGGCATCGTGGCTGGAGGG |
| CHAK00314 |
15 |
64 |
Not Confirmed |
Likely |
Low |
African |
Coding |
Thr |
Met |
Nonsynonymous |
2 |
ACG |
ATG |
Z30644 |
C |
0.9 |
T |
0.1 |
CCCACCGCGTGAGGGTGGAGCACTTCATGAACCACAGCATCACCACACTGGCCAAGGACA*GCCACTGGAGGAGGTGGTCAAGGTTGTGACCTCCACAGACGTGGCCGAGTATCCCTTGGT |
| CHAK00315 |
15 |
68 |
Not Confirmed |
Likely |
Low |
African |
N/A |
Pro |
Pro |
Synonymous |
3 |
CCA |
CCG |
Z30644 |
A |
0.1 |
G |
0.9 |
CCGCGTGAGGGTGGAGCACTTCATGAACCACAGCATCACCACACTGGCCAAGGACACGCC*CTGGAGGAGGTGGTCAAGGTTGTGACCTCCACAGACGTGGCCGAGTATCCCTTGGTGGAG |
| CHAK00316 |
18 |
51 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Ser |
Trp |
Nonsynonymous |
2 |
TCG |
TGG |
Z30644 |
C |
0.95 |
T |
0.05 |
CCCTGCATGAGGCACACAACCTCTTTGAGCTGTTGAACCTTCATTCCCTCTTTGTGACGT*GCGGGGCAGAGCTGTGGGCTGCGTGTCCTGGGTGGAGATGAAGAAAGCAATTTCCAACCT |
| CHAK00317 |
3 |
34 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Ser |
Arg |
Nonsynonymous |
1 |
AGC |
CGC |
Z30644 |
A |
0.95 |
C |
0.05 |
GACTTGGCTGTTGAGAGTGTGGTCCGAGCGCACCAGTGGCTGTACAGGGAGATTGGGGAC*GCCACCTGCTCCGGTATCTCTCCTGGACTGTGTACCCTGTGGCCCTCGTCTCTTTCTCTT |
| CHAK00318 |
3 |
96 |
Not Confirmed |
Likely |
Low |
U.S. White |
Coding |
Ser |
Ser |
Synonymous |
3 |
TCG |
TCA |
Z30644 |
G |
0.9 |
A |
0.1 |
CCACCTGCTCCGGTATCTCTCCTGGACTGTGTACCCTGTGGCCCTCGTCTCTTTCTCTTC*GGCTTCTCTCAGAGCATCACACCCTCCTCTGGAGGTTCTGGAATCCCGGAGGTGAAGACC |
| CHAK00319 |
4 |
19 |
Not Confirmed |
Likely |
High |
African |
Coding |
Val |
Leu |
Nonsynonymous |
1 |
GTG |
CTG |
Z30644 |
G |
0.5 |
C |
0.5 |
TCTTCGGGCTTCTCTCAGAGCATCACACCCTCCTCTGGAGGTTCTGGAATCCCGGAG*TGAAGACCATGTTGGCGGGTGTGGTCTTGGAGGACTACCTGGATATCAAGAACTTTGGGG |
| CHAK00320 |
4 |
70 |
Not Confirmed |
Likely |
Low |
African |
Coding |
Asn |
His |
Nonsynonymous |
1 |
AAC |
CAC |
Z30644 |
A |
0.9 |
C |
0.1 |
ATCCCGGAGGTGAAGACCATGTTGGCGGGTGTGGTCTTGGAGGACTACCTGGATATCAAG*ACTTTGGGGCCAAAGTGGTGGGCCTCTCCTGCACCCTGGCCTGTGGCAGCACCCTCTTCC |
| CHAK00321 |
7 |
108 |
Not Confirmed |
Likely |
Low |
African |
Coding |
Ala |
Ala |
Synonymous |
3 |
GCG |
GCA |
Z30644 |
G |
0.9 |
A |
0.1 |
GGATTACTGGAGGGGCTTCTTTGCGGCCACCTGCGGGGCCTTCATGTTCCGGCTCCTGGC*GTCTTCAACAGCGAGCAGGAGACCATCACCTCCCTCTACAAGACCAGTTTCCGGGTGGA |