| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00341 |
1 |
351 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32863 |
T |
0.95 |
C |
0.05 |
ACCTCTGCCCTCGGTCTCTCAGGCAGATCCAGGGCCAGTTCTCCCATGACGTGATCCCTC*CGAAGGCAAGGCACCAGGCAAGATAAAAGGATTGCAGCTGAACAGGGTGGAGGGAGCATT |
| CHAK00342 |
1 |
525 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Pro |
Pro |
Synonymous |
3 |
CCC |
CCG |
M32863 |
C |
0.95 |
G |
0.05 |
CCTGCAAAGGGCACAGGCACTGGGCACGAGAGCCGCCCGGGTCCCCAGGACAGTGCTGCC*TTTGAAGCCATGCCCCGGCGTCCAGGCAACAGGTGGCTGAGGCTGCTGCAGATCTGGAGG |
| CHAK00343 |
1 |
542 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Arg |
Gln |
Nonsynonymous |
2 |
CGG |
CAG |
M32863 |
G |
0.95 |
A |
0.05 |
CACTGGGCACGAGAGCCGCCCGGGTCCCCAGGACAGTGCTGCCCTTTGAAGCCATGCCCC*GCGTCCAGGCAACAGGTGGCTGAGGCTGCTGCAGATCTGGAGGGAGCAGGGTTATGAGGA |
| CHAK00344 |
1 |
601 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Asp |
His |
Nonsynonymous |
1 |
GAC |
CAC |
M32863 |
G |
0.95 |
C |
0.05 |
CGGCGTCCAGGCAACAGGTGGCTGAGGCTGCTGCAGATCTGGAGGGAGCAGGGTTATGAG*ACCTGCACCTGGAAGTACACCAGACCTTCCAGGAACTGGGGCCCATTTTCAGGTAAAGCC |
| CHAK00345 |
2 |
36 |
Not Confirmed |
Certain |
High |
U.S. White |
Coding |
Asp |
Asp |
Synonymous |
3 |
GAT |
GAC |
M32863 |
T |
0.5 |
C |
0.5 |
GGGGCCAGCAGGGACTAGACCCCGTCCAGCAGGGCCTCCTGCTTGGCCCCACAGGTACGA*TTGGGAGGAGCAGGCATGGTGTGTGTGATGCTGCCGGAGGACGTGGAGAAGCTGCAACAG |
| CHAK00346 |
2 |
78 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Asp |
Asp |
Synonymous |
3 |
GAC |
GAT |
M32863 |
C |
0.95 |
T |
0.05 |
TTGGCCCCACAGGTACGATTTGGGAGGAGCAGGCATGGTGTGTGTGATGCTGCCGGAGGA*GTGGAGAAGCTGCAACAGGTGGACAGCCTGCATCCCCACAGGATGAGCCTGGAGCCCTGG |
| CHAK00347 |
2 |
184 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Leu |
Leu |
Synonymous |
1 |
CTG |
TTG |
M32863 |
C |
0.95 |
T |
0.05 |
AGCCTGGAGCCCTGGGTGGCCTACAGACAACATCGTGGGCACAAATGTGGCGTGTTCTTG*TGTAAGCGGCGAGCTGAGAGCTGGGAGCAGGGTGGGCAGCCTGGGTGTAGGGGGGAGGCG |
| CHAK00348 |
2 |
188 |
Not Confirmed |
Likely |
Rare |
African |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32863 |
A |
0.95 |
G |
0.05 |
TGGAGCCCTGGGTGGCCTACAGACAACATCGTGGGCACAAATGTGGCGTGTTCTTGCTGT*AGCGGCGAGCTGAGAGCTGGGAGCAGGGTGGGCAGCCTGGGTGTAGGGGGGAGGCGAGAG |
| CHAK00349 |
3 |
114 |
Not Confirmed |
Certain |
Rare |
African |
Coding |
Met |
Ile |
Nonsynonymous |
3 |
ATG |
ATC |
M32878 |
G |
0.95 |
C |
0.05 |
CCGATTGCGGCTGAATCCAGAAGTGCTGTCGCCCAACGCTGTGCAGAGGTTCCTCCCGAT*GTGGATGCAGTGGCCAGGGACTTCTCCCAGGCCCTGAAGAAGAAGGTGCTGCAGAACGCC |
| CHAK00350 |
4 |
177 |
Not Confirmed |
Certain |
Rare |
Both |
Coding |
Thr |
Ile |
Nonsynonymous |
2 |
ACC |
ATC |
M32878 |
C |
0.95 |
T |
0.05 |
AGGTCATGTTCAAATCCACCGTCCAGCTCATGTTCATGCCCAGGAGCCTGTCTCGCTGGA*CAGCCCCAAGGTGTGGAAGGAGCACTTTGAGGCCTGGGACTGCATCTTCCAGTACGGTGA |
| CHAK00351 |
4 |
205 |
Not Confirmed |
Likely |
Low |
African |
Coding |
Phe |
Leu |
Nonsynonymous |
3 |
TTT |
TTG |
M32878 |
T |
0.9 |
G |
0.1 |
CATGTTCATGCCCAGGAGCCTGTCTCGCTGGACCAGCCCCAAGGTGTGGAAGGAGCACTT*GAGGCCTGGGACTGCATCTTCCAGTACGGTGAGGCCAGGGACCCGGGCAGTGCTATGGGG |
| CHAK00352 |
4 |
247 |
Not Confirmed |
Likely |
Medium |
U.S. White |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32878 |
C |
0.85 |
G |
0.15 |
GGTGTGGAAGGAGCACTTTGAGGCCTGGGACTGCATCTTCCAGTACGGTGAGGCCAGGGA*CCGGGCAGTGCTATGGGGAAGGACACCATCGGGCCCCCAATTTCTCCCTCTCCA |
| CHAK00353 |
5 |
16 |
Not Confirmed |
Likely |
High |
African |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32878 |
C |
0.45 |
T |
0.55 |
AGGAGGAGGACACTGAAGGATGTTTCCCAGCACCAAAGTCTGAGGGCTGCCTCC*GCTCCCCGGATAGGCGACAACTGTATCCAGAAAATCTATCAGGAACTGGCCTTCAGCCGC |
| CHAK00354 |
5 |
55 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Tyr |
Tyr |
Synonymous |
3 |
TAT |
TAC |
M32878 |
T |
0.95 |
C |
0.05 |
CAAAGTCTGAGGGCTGCCTCCCGCTCCCCGGATAGGCGACAACTGTATCCAGAAAATCTA*CAGGAACTGGCCTTCAGCCGCCCTCAACAGTACACCAGCATCGTGGCGGAGCTCCTGTTG |
| CHAK00355 |
5 |
72 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Ser |
Asn |
Nonsynonymous |
2 |
AGC |
AAC |
M32878 |
G |
0.95 |
A |
0.05 |
CTCCCGCTCCCCGGATAGGCGACAACTGTATCCAGAAAATCTATCAGGAACTGGCCTTCA*CCGCCCTCAACAGTACACCAGCATCGTGGCGGAGCTCCTGTTGAATGCGGAACTGTCGCC |
| CHAK00356 |
5 |
103 |
Not Confirmed |
Certain |
Low |
Both |
Coding |
Ala |
Ala |
Synonymous |
3 |
GCG |
GCA |
M32878 |
G |
0.9 |
A |
0.1 |
CCAGAAAATCTATCAGGAACTGGCCTTCAGCCGCCCTCAACAGTACACCAGCATCGTGGC*GAGCTCCTGTTGAATGCGGAACTGTCGCCAGATGCCATCAAGGCCAACTCTATGGAACTC |
| CHAK00357 |
5 |
107 |
Confirmed |
Likely |
Medium |
U.S. White |
Coding |
Leu |
Val |
Nonsynonymous |
1 |
CTC |
GTC |
M32878 |
C |
0.8 |
G |
0.2 |
AAAATCTATCAGGAACTGGCCTTCAGCCGCCCTCAACAGTACACCAGCATCGTGGCGGAG*TCCTGTTGAATGCGGAACTGTCGCCAGATGCCATCAAGGCCAACTCTATGGAACTCACTG |
| CHAK00358 |
7 |
52 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Leu |
Leu |
Synonymous |
1 |
CTG |
TTG |
M32878 |
C |
0.95 |
T |
0.05 |
CCAGCTGAGACCCTTTCTATGGATGCCCCCACCTCCAGGCTCTACCCTGTGGGTCTGTTT*TGGAGCGAGTGGCGAGCTCAGACTTGGTGCTTCAGAACTACCACATCCCAGCTGGGGTGA |
| CHAK00359 |
8 |
144 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Tyr |
His |
Nonsynonymous |
1 |
TAC |
CAC |
M32878 |
T |
0.95 |
C |
0.05 |
AGGCCTGAGCGCTATAACCCCCAGCGCTGGCTAGACATCAGGGGCTCCGGCAGGAACTTC*ACCACGTGCCCTTTGGCTTTGGCATGCGCCAGTGCCTTGGGCGGCGCCTGGCAGAGGCAG |
| CHAK00360 |
9 |
16 |
Not Confirmed |
Likely |
Rare |
African |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
G |
0.95 |
C |
0.05 |
TCTGAGAAGGCTGCACCACGTCGATGGGCTGCGGACCAAGCCAGATGGAAACCC*GCTTCTGTCCTAGGTGCTGAAACACCTCCAGGTGGAGACACTAACCCAAGAGGACATAAA |
| CHAK00361 |
9 |
62 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Thr |
Thr |
Synonymous |
3 |
ACC |
ACT |
M32879 |
C |
0.95 |
T |
0.05 |
CCAGATGGAAACCCGGCTTCTGTCCTAGGTGCTGAAACACCTCCAGGTGGAGACACTAAC*CAAGAGGACATAAAGATGGTCTACAGCTTCATATTGAGGCCCAGCATGTGCCCCCTCCTC |
| CHAK00362 |
9 |
274 |
Not Confirmed |
Likely |
Low |
Both |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
T |
0.95 |
C |
0.05 |
TTCTCTCCCACATGCACAGCTTCCTGAGTCACCCCTCTGTCTAACCAGCCCCAGCACAAA*GGAACTCCCGAGGGCCTCTAGGACCAGGGTTTGCCAGGCTAAGCAGCAATGCCAGGGCAC |
| CHAK00363 |
9 |
350 |
Not Confirmed |
Likely |
Low |
U.S. White |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
T |
0.9 |
G |
0.1 |
CTCTAGGACCAGGGTTTGCCAGGCTAAGCAGCAATGCCAGGGCACAGCTGGGGAAGATCT*GCTGACCTTGTCCCCAGCCCCACCTGGCCCTTTCTCCAGCAAGCACTGTCCTCTGGCAGT |
| CHAK00364 |
9 |
459 |
Not Confirmed |
Certain |
Medium |
Both |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
G |
0.75 |
A |
0.25 |
TCCTCTGGCAGTTTGCCCCCATCCCTCCCAGTGCTGGCTCCAGGCTCCTCGTGTGGCCAT*CAAGGGTGCTGTGGTTTTGTCCCTTGCCTTCCTGCCTCTAGTCTCACATGTCCCTGTTCC |
| CHAK00365 |
9 |
592 |
Not Confirmed |
Likely |
Low |
U.S. White |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
A |
0.9 |
C |
0.1 |
AGGGCCCCTGCGCAGACTGTCAGAGTCATTAAGCGGGATCCCAGCATCTAGAGTCCAGTC*AGTTCCCTCCTGCAGCCTGCCCCCTAGGCAGCTCGAGCATGCCCTGAGCTCTCTGAAAGT |
| CHAK00366 |
9 |
657 |
Not Confirmed |
Certain |
High |
Both |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
G |
0.6 |
A |
0.4 |
CCCTCCTGCAGCCTGCCCCCTAGGCAGCTCGAGCATGCCCTGAGCTCTCTGAAAGTTGTC*CCCTGGAATAGGGTCCTGCAGGGTAGAATAAAAAGGCCCCTGTGGTCACTTGTCCTGACA |
| CHAK00367 |
9 |
786 |
Not Confirmed |
Likely |
Medium |
U.S. White |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
A |
0.85 |
G |
0.15 |
TTCAAGTGATACAACTGAGTCTCGAGGGACGTGTGTTCCCCAGCTGATCGTGTCAGCCTC*TGCCCCTGGCCTCATCTTTCATGGACCAGGCCTTGTTCCAGGAGTGGGCGTTGGGTCCTC |
| CHAK00368 |
9 |
835 |
Not Confirmed |
Certain |
Medium |
U.S. White |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
C |
0.8 |
T |
0.2 |
GTGTCAGCCTCATGCCCCTGGCCTCATCTTTCATGGACCAGGCCTTGTTCCAGGAGTGGG*GTTGGGTCCTCTGCTTCCTGTGCTGTCCCCTGGGGAAGGTCCCAAGGATGCTGTCAGGAG |
| CHAK00369 |
9 |
879 |
Not Confirmed |
Certain |
High |
Both |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M32879 |
A |
0.65 |
G |
0.35 |
TTGTTCCAGGAGTGGGCGTTGGGTCCTCTGCTTCCTGTGCTGTCCCCTGGGGAAGGTCCC*AGGATGCTGTCAGGAGATGGAAGAGTCATGTGGGGTGGGAACCTGGGGTGTGGTTCCAGA |