| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00518 |
1 |
184 |
Not Confirmed |
Likely |
Medium |
U.S. White |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
U47924 |
A |
0.85 |
C |
0.15 |
GCCTGGGGAGCTGGGACGGGGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAAC*CTGTGCCTCCCTGAACAGAAATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATG |
| CHAK00519 |
1 |
201 |
Not Confirmed |
Certain |
High |
U.S. White |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
U47924 |
A |
0.55 |
G |
0.45 |
GGGGCCCCGCTGCCGGACCTGCAGCCCTGGACAGATGGGGAACACTGTGCCTCCCTGAAC*GAAATGGCAGGGGAGGAGGCTGATGCTTTAAATGAAGAGGATGGTGGGGTTGGGAGGTAT |
| CHAK00520 |
1 |
328 |
Not Confirmed |
Certain |
High |
U.S. White |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
U47924 |
A |
0.6 |
G |
0.4 |
GCTCCTCTCTCCCAGTCTGTGCAATAAAGGTCGTGAAGATCTCTCAGCCAGGGGCCAGTC*AGTGTATCACAGATTCTGTGATGGCTGGAGGTGGGGGTGGCTCTGGCTGGCCTGGGAGGA |
| CHAK00521 |
10 |
144 |
Not Confirmed |
Certain |
Low |
U.S. White |
Coding |
Gly |
Ser |
Nonsynonymous |
1 |
GGC |
AGC |
U47924 |
G |
0.9 |
A |
0.1 |
TTGTTTGACCTGCGGGCAGACCAGGAGCTGATCTGCTTCTCCCACGAGAGCATCATCTGC*GCATCACGTCCGTGGCCTTCTCCCTCAGTGGCCGCCTACTATTCGCTGGCTACGACGACT |
| CHAK00522 |
10 |
155 |
Confirmed |
Certain |
High |
Both |
Coding |
Ser |
Ser |
Synonymous |
3 |
TCC |
TCT |
U47924 |
C |
0.35 |
T |
0.65 |
GCGGGCAGACCAGGAGCTGATCTGCTTCTCCCACGAGAGCATCATCTGCGGCATCACGTC*GTGGCCTTCTCCCTCAGTGGCCGCCTACTATTCGCTGGCTACGACGACTTCAACTGCAAT |
| CHAK00523 |
11 |
129 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Trp |
Leu |
Nonsynonymous |
2 |
TGG |
TTG |
U47924 |
G |
0.95 |
T |
0.05 |
GAGTCACAGCTGACGGGATGGCTGTGGCCACAGGTTCCTGGGACAGCTTCCTCAAAATCT*GAACTGAGGAGGCTGGAGAAAGGGAAGTGGAAGGCAGTGAACACACTCAGCAGCCCCCTG |
| CHAK00524 |
11 |
254 |
Not Confirmed |
Certain |
High |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
U47924 |
C |
0.7 |
T |
0.3 |
ACCCCATCTCATTCAGGTGTTCTCTTCTATATTCCGGGTGCCATTCCCACTAAGCTTTCT*CTTTGAGGGCAGTGGGGAGCATGGGACTGTGCCTTTGGGAGGCAGCATCAGGGACACAGG |
| CHAK00525 |
11 |
536 |
Not Confirmed |
Certain |
High |
Both |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
U47924 |
C |
0.5 |
T |
0.5 |
TACCTTTGTCCAGGCCTGGGTGGTATAGGGCGTTTGGCCCTGTGACTATGGCTCTGGCAC*ACTAGGGTCCTGGCCCTCTTCTTATTCATGCTTTCTCCTTTTTCTACCTTTTTTTCTCTC |
