| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00545 |
1 |
135 |
Not Confirmed |
Certain |
Rare |
African |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M69197 |
T |
0.95 |
C |
0.05 |
TGAAAAAACTCAAAATGAGCCTTTCTGCAGTGTGAAAATCCTCCAAGATAAAGAGACAGA*TGATGGTTCCTGCCGCCGCCCTGTCCTGCCCAGTTGCTGATTTCAGGAAATACTTTGGCA |
| CHAK00546 |
1 |
188 |
Not Confirmed |
Likely |
Low |
Both |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M69197 |
C |
0.95 |
T |
0.05 |
AGACAGATTGATGGTTCCTGCCGCCGCCCTGTCCTGCCCAGTTGCTGATTTCAGGAAATA*TTTGGCAGGTTTGTGGGTCATAGAGTTGCCAGGTTTCTTGGGATTTGTAATAGAACATCA |
| CHAK00547 |
1 |
239 |
Not Confirmed |
Likely |
Rare |
Both |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M69197 |
T |
0.95 |
G |
0.05 |
CAGGAAATACTTTGGCAGGTTTGTGGGTCATAGAGTTGCCAGGTTTCTTGGGATTTGTAA*AGAACATCACAAGAAAATCAAGTGTGAAGCAAGAGCTCAACTCTTAACAGGGGTATTGTT |
| CHAK00548 |
1 |
326 |
Not Confirmed |
Certain |
High |
African |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M69197 |
T |
0.6 |
A |
0.4 |
AAGCAAGAGCTCAACTCTTAACAGGGGTATTGTTTGTGGTTTTGTTACTGGAAAAGATAG*GACCTTACCAGGGCCAAAGTTTGTAGACACAGGAATTACGAAATGGAGAAGGGGGAGAAG |
| CHAK00549 |
1 |
329 |
Not Confirmed |
Likely |
Medium |
African |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M69197 |
C |
0.75 |
G |
0.25 |
CAAGAGCTCAACTCTTAACAGGGGTATTGTTTGTGGTTTTGTTACTGGAAAAGATAGTGA*CTTACCAGGGCCAAAGTTTGTAGACACAGGAATTACGAAATGGAGAAGGGGGAGAAGTGA |
| CHAK00550 |
1 |
369 |
Not Confirmed |
Likely |
Medium |
African |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M69197 |
A |
0.9 |
C |
0.1 |
GTTACTGGAAAAGATAGTGACCTTACCAGGGCCAAAGTTTGTAGACACAGGAATTACGAA*TGGAGAAGGGGGAGAAGTGAGCTAGTGGCAGCATAAAAAGACCAGCAGATGCCCCACAGC |
| CHAK00551 |
1 |
375 |
Not Confirmed |
Certain |
Medium |
African |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M69197 |
A |
0.85 |
G |
0.15 |
GGAAAAGATAGTGACCTTACCAGGGCCAAAGTTTGTAGACACAGGAATTACGAAATGGAG*AGGGGGAGAAGTGAGCTAGTGGCAGCATAAAAAGACCAGCAGATGCCCCACAGCACTGCT |
| CHAK00552 |
4 |
34 |
Not Confirmed |
Likely |
High |
Both |
Coding |
Val |
Val |
Synonymous |
3 |
GTA |
GTG |
M69197 |
A |
0.65 |
G |
0.35 |
TGCTCTGGGTGCAGACTTGACTTTTCCTTTGGCTCATTTCTTGCCTTTTGTTTCAGGAGT*TACACCTTAAATGATAAGAAGCAGTGGATAAATAAGGCTGTTGGAGATAAACTTCCTGAA |
| CHAK00553 |
6 |
34 |
Not Confirmed |
Likely |
High |
Both |
Coding |
Val |
Val |
Synonymous |
3 |
GTA |
GTG |
M69197 |
G |
0.65 |
A |
0.35 |
TGCACGGGGTCTAGACTTGACTTCTCCTTTGGCTCACTTCTTGCCTTTTGTTTCAGGAGT*TACACCTTAAACAATGAGAAGCAGTGGATAAATAAGGCTGTTGGAGATAAACTTCCTGAA |
| CHAK00554 |
7 |
367 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Glu |
Glu |
Synonymous |
3 |
GAG |
GAA |
M69197 |
G |
0.95 |
A |
0.05 |
TAACTACTCCCAGGTAGATATTGGGCTCATCAAACTCAAACAGAAGGTGTCTGTTAATGA*AGAGTGATGCCCATCTGCCTACCTTCAAAGGATTATGCAGAAGTAGGGCGTGTGGGTTAT |
| CHAK00555 |
7 |
610 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Ala |
Ala |
Synonymous |
3 |
GCT |
GCC |
M69197 |
T |
0.95 |
C |
0.05 |
GAAGACACCGAAGAGCCCTGTAGGGGTGCAGCCCATACTGAATGAACACACCTTCTGTGC*GGCATGTCTAAGTACCAAGAAGACACCTGCTATGGCGATGCGGGCAGTGCCTTTGCCGTT |
| CHAK00556 |
7 |
673 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
His |
His |
Synonymous |
3 |
CAC |
CAT |
M69197 |
C |
0.95 |
T |
0.05 |
CATGTCTAAGTACCAAGAAGACACCTGCTATGGCGATGCGGGCAGTGCCTTTGCCGTTCA*GACCTGGAGGAGGACACCTGGTATGCGACTGGGATCTTAAGCTTTGATAAGAGCTGTGCT |
| CHAK00557 |
7 |
1331 |
Not Confirmed |
Certain |
Rare |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
M69197 |
C |
0.95 |
T |
0.05 |
TTTGAACCCAGGTCTGTTTGATACAAACTCAGAGGTCCTTTCACTGCATGCTGTTGCCTC*TCAAAGTGAATTAGGAGAAAAGGCATGGGCCTGGTTGAGGAAGAGGCTAGCTCAAAATGG |
