Cyclooxygenase 1 (PTGS1)

SNP Number Exon Position In Exon Confirmation Call Quality Heterozygosity Class Sample Detected Location In gene Amino Acid 1 Amino Acid 2 Type of Amino Acid Change Codon Position Codon 1 Codon 2 GenBank Accession # Allele 1 Allele 1 Frequency Allele 2 Allele 2 Frequency Flanking Sequence
CHAK00876 N/A 310 Not Confirmed Likely N/A cDNA Coding Arg Gln Nonsynonymous 2 CGA CAA M59979 G N/A A N/A CCCACTTCCTGCTCACTCACGGGCGCTGGTTCTGGGAGTTTGTCAATGCCACCTTCATCC*AGAGATGCTCATGCGCCTGGTACTCACAGTGCGCTCCAACCTTATCCCCAGTCCCCCCAC
CHAK00877 N/A 626 Not Confirmed Certain N/A cDNA Coding Gly Gly Synonymous 3 GGC GGA M59979 C N/A A N/A CAACCTCATGTTTGCCTTCTTTGCACAACACTTCACCCACCAGTTCTTCAAAACTTCTGG*AAGATGGGTCCTGGCTTCACCAAGGCCTTGGGCCATGGGGTAGACCTCGGCCACATTTAT
CHAK00878 N/A 696 Not Confirmed Likely N/A cDNA Coding Leu Met Nonsynonymous 1 CTG ATG M59979 C N/A A N/A CCTGGCTTCACCAAGGCCTTGGGCCATGGGGTAGACCTCGGCCACATTTATGGAGACAAT*TGGAGCGTCAGTATCAACTGCGGCTCTTTAAGGATGGGAAACTCAAGTACCAGGTGCTGG
CHAK00879 N/A 938 Not Confirmed Likely N/A cDNA Coding Ala Ala Synonymous 3 GCT GCC M59979 T N/A C N/A CATGCTGTATGCCACGCTCTGGCTACGTGAGCACAACCGTGTGTGTGACCTGCTGAAGGC*GAGCACCCCACCTGGGGCGATGAGCAGCTTTTCCAGACGACCCGCCTCATCCTCATAGGG
CHAK00880 N/A 1063 Not Confirmed Likely N/A cDNA Coding Lys Arg Nonsynonymous 2 AAA AGA M59979 A N/A G N/A CCATCAAGATTGTCATCGAGGAGTACGTGCAGCAGCTGAGTGGCTATTTCCTGCAGCTGA*ATTTGACCCAGAGCTGCTGTTCGGTGTCCAGTTCCAATACCGCAACCGCATTGCCATGGA
CHAK00881 N/A 1314 Not Confirmed Likely N/A cDNA Coding Ile Val Nonsynonymous 1 ATC GTC M59979 A N/A G N/A GATGCCTTCTCTCGCCAGATTGCTGGCCGGATCGGTGGGGGCAGGAACATGGACCACCAC*TCCTGCATGTGGCTGTGGATGTCATCAGGGAGTCTCGGGAGATGCGGCTGCAGCCCTTCA
CHAK00882 N/A 1386 Not Confirmed Likely N/A cDNA Coding Lys Glu Nonsynonymous 1 AAG GAG M59979 A N/A G N/A GCTGTGGATGTCATCAGGGAGTCTCGGGAGATGCGGCTGCAGCCCTTCAATGAGTACCGC*AGAGGTTTGGCATGAAACCCTACACCTCCTTCCAGGAGCTCGTAGGAGAGAAGGAGATGG
CHAK00883 N/A 1428 Not Confirmed Likely N/A cDNA Coding Val Ile Nonsynonymous 1 GTA ATA M59979 G N/A A N/A CCCTTCAATGAGTACCGCAAGAGGTTTGGCATGAAACCCTACACCTCCTTCCAGGAGCTC*TAGGAGAGAAGGAGATGGCAGCAGAGTTGGAGGAATTGTATGGAGACATTGATGCGTTGG
CHAK00884 N/A 1906 Not Confirmed Likely N/A cDNA 3' UTR N/A N/A N/A 0 N/A N/A M59979 T N/A C N/A GAGGCCAGGGCTGATGGTCTTAAATGCTCATTTTCTGGTTTGGCATGGTGAGTGTTGGGG*TGACATTTAGAACTTTAAGTCTCACCCATTATCTGGAATATTGTGATTCTGTTTATTCTT
CHAK00885 N/A 1948 Not Confirmed Likely N/A cDNA 3' UTR N/A N/A N/A 0 N/A N/A M59979 T N/A C N/A GCATGGTGAGTGTTGGGGTTGACATTTAGAACTTTAAGTCTCACCCATTATCTGGAATAT*GTGATTCTGTTTATTCTTCCAGAATGCTGAACTCCTTGTTAGCCCTTCAGATTGTTAGGA
CHAK00886 N/A 2037 Not Confirmed Likely N/A cDNA 3' UTR N/A N/A N/A 0 N/A N/A M59979 T N/A G N/A GAACTCCTTGTTAGCCCTTCAGATTGTTAGGAGTGGTTCTCATTTGGTCTGCCAGAATAC*GGGTTCTTAGTTGACAACCTAGAATGTCAGATTTCTGGTTGATTTGTAACACAGTCATTC
Please e-mail any questions or suggestions to Michael A. Choma or Marc Halushka.