| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00331 |
1 |
186 |
Confirmed |
Likely |
Low |
African |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D28235 |
C |
0.9 |
G |
0.1 |
GGGACTACCCCCTCTGCTCCCAAATTGGGGCAGCTTCCTGGGTTTCCGATTTTCTCATTT*CGTGGGTAAAAAACCCTGCCCCCACCGGGCTTACGCAATTTTTTTAAGGGGAGAGGAGGG |
| CHAK00332 |
1 |
358 |
Confirmed |
Likely |
Medium |
African |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D28235 |
T |
0.85 |
G |
0.15 |
ATGGGCTTGGTTTTCAGTCTTATAAAAAGGAAGGTTCTCTCGGTTAGCGACCAATTGTCA*ACGACTTGCAGTGAGCGTCAGGAGCACGTCCAGGAACTCCTCAGCAGCGCCTCCTTCAGC |
| CHAK00333 |
10 |
87 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Glu |
Gly |
Nonsynonymous |
2 |
GAG |
GGG |
D28235 |
A |
0.95 |
G |
0.05 |
CAGGAGAAAAGGAAATGTCTGCAGAGTTGGAAGCACTCTATGGTGACATCGATGCTGTGG*GCTGTATCCTGCCCTTCTGGTAGAAAAGCCTCGGCCAGATGCCATCTTTGGTGAAACCAT |
| CHAK00334 |
10 |
156 |
Not Confirmed |
Certain |
Low |
African |
Coding |
Val |
Ala |
Nonsynonymous |
2 |
GTT |
GCT |
D28235 |
T |
0.95 |
C |
0.05 |
CTGCCCTTCTGGTAGAAAAGCCTCGGCCAGATGCCATCTTTGGTGAAACCATGGTAGAAG*TGGAGCACCATTCTCCTTGAAAGGACTTATGGGTAATGTTATATGTTCTCCTGCCTACTG |
| CHAK00335 |
10 |
379 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Arg |
Arg |
Synonymous |
3 |
CGC |
CGA |
D28235 |
C |
0.95 |
A |
0.05 |
ATTCAGTGTTCCAGATCCAGAGCTCATTAAAACAGTCACCATCAATGCAAGTTCTTCCCG*TCCGGACTAGATGATATCAATCCCACAGTACTACTAAAAGAACGTTCGACTGAACTGTAG |
| CHAK00336 |
10 |
866 |
Not Confirmed |
Certain |
High |
Both |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D28235 |
T |
0.45 |
C |
0.55 |
ATGCATCTTCCATGATGCATTAGAAGTAACTAATGTTTGAAATTTTAAAGTACTTTTGGT*ATTTTTCTGTCATCAAACAAAAACAGGTATCAGTGCATTATTAAATGAATATTTAAATTA |
| CHAK00337 |
10 |
937 |
Not Confirmed |
Certain |
Medium |
African |
3' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
D28235 |
G |
0.85 |
A |
0.15 |
CATCAAACAAAAACAGGTATCAGTGCATTATTAAATGAATATTTAAATTAGACATTACCA*TAATTTCATGTCTACTTTTTAAAATCAGCAATGAAACAATAATTTGAAATTTCTAAATTC |
| CHAK00338 |
3 |
166 |
Not Confirmed |
Likely |
Low |
U.S. White |
Coding |
Val |
Val |
Synonymous |
3 |
GTG |
GTC |
D28235 |
G |
0.9 |
C |
0.1 |
GGGATTTTGGAACGTTGTGAATAACATTCCCTTCCTTCGAAATGCAATTATGAGTTATGT*TTGACATGTAAGTACAAGTGTCTTTCTAAGGTTTTTAGCCTTCTCAAAGAAAAATATGCT |
| CHAK00339 |
7 |
206 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
Asp |
Asp |
Synonymous |
3 |
GAT |
GAC |
D28235 |
T |
0.95 |
C |
0.05 |
GGTGCCTGGTCTGATGATGTATGCCACAATCTGGCTGCGGGAACACAACAGAGTATGCGA*GTGCTTAAACAGGAGCATCCTGAATGGGGTGATGAGCAGTTGTTCCAGACAAGCAGGCTA |
| CHAK00340 |
8 |
268 |
Not Confirmed |
Likely |
Rare |
African |
Coding |
His |
His |
Synonymous |
3 |
CAT |
CAC |
D28235 |
T |
0.95 |
C |
0.05 |
TCATGACCAGAAATACAACTATCAACAGTTTATCTACAACAACTCTATATTGCTGGAACA*GGAATTACCCAGTTTGTTGAATCATTCACCAGGCAAATTGCTGGCAGGGTAAGCATTATT |
