| SNP Number |
Exon |
Position In Exon |
Confirmation |
Call Quality |
Heterozygosity Class |
Sample Detected |
Location In gene |
Amino Acid 1 |
Amino Acid 2 |
Type of Amino Acid Change |
Codon Position |
Codon 1 |
Codon 2 |
GenBank Accession # |
Allele 1 |
Allele 1 Frequency |
Allele 2 |
Allele 2 Frequency |
Flanking Sequence |
| CHAK00792 |
1 |
76 |
Confirmed |
Likely |
Rare |
African |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
AC004381 |
G |
0.95 |
T |
0.05 |
TAATTTGCTTTCTCCGCCCCTCAAAAGCTTGCTGTTTCTGTAAATCATTACCTGTAAGAG*AACCGCTGGGAGTCCTGTAAACTTTAGCCCAGAGCTTGGCTCCTCCTCCAGAATGTCTCC |
| CHAK00793 |
1 |
167 |
Confirmed |
Certain |
Low |
U.S. White |
Promoter |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
AC004381 |
T |
0.9 |
C |
0.1 |
AGAGCTTGGCTCCTCCTCCAGAATGTCTCCACCAATCAAGGAAAGTGTTTTGGGCCAGTC*TGCTCCTCCGGATTGTCAGACTGCTCCTCCCTCTTCTTTAGACTGCCACGAGGAAAAAGC |
| CHAK00794 |
11 |
143 |
Confirmed |
Likely |
Rare |
African |
Coding |
Val |
Val |
Synonymous |
3 |
GTC |
GTT |
AC004381 |
C |
0.95 |
T |
0.05 |
GGACAGAGGATATATGGATAAAGATGGGTATTTCTGGTTTGTTGCAAGAGCAGATGATGT*ATATTATCCTCTGGGTAACTTTCTTTTCCATATGTGCATATGTCTGTGTTAACTGATCAT |
| CHAK00795 |
2 |
54 |
Confirmed |
Likely |
Rare |
African |
5' UTR |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
AC004381 |
T |
0.95 |
C |
0.05 |
AGAAACAAATATATGTCCTTTTTGCTTGTCTTTTAGATGAACTGGTCTCTGTGCAAATCC*GAGTGCTAAAGCTTCCAACAAGACTGATGCTAGCTCGTGTCACCAGGAAGATGCTACGTC |
| CHAK00796 |
3 |
109 |
Not Confirmed |
Likely |
Rare |
U.S. White |
Coding |
Leu |
Pro |
Nonsynonymous |
2 |
CTG |
CCG |
AC004381 |
T |
0.95 |
C |
0.05 |
ATCCAGCCTTCTGGTGGATCAACAGAAATGGAGAAGAGATGCGATGGAGTTTTGAGGAAC*GGGATCTCTGTCCAGAAAATTTGCCAATATACTTTCAGAAGCCTGTTCCCTACAAAGAGG |
| CHAK00797 |
4 |
187 |
Not Confirmed |
Certain |
Medium |
African |
Coding |
Ile |
Ile |
Synonymous |
3 |
ATT |
ATC |
AC004381 |
T |
0.8 |
C |
0.2 |
TTTAGCCCCAGCAGTAGACGCTGTTGCATCCAAATGTGAAAATCTGCACTCCAAGCTGAT*GTATCAGAGAACTCCAGAGAGGGGTGGGGGAACCTCAAGGAGTTGATGAAGTGAGTAGCC |
| CHAK00798 |
5 |
182 |
Not Confirmed |
Certain |
High |
Both |
Intron |
N/A |
N/A |
N/A |
0 |
N/A |
N/A |
AC004381 |
T |
0.3 |
C |
0.7 |
TGACTGCACACACCCACAGCAGTTTTGGTTTAGGATTATCTGTAAATGGAAGGTATACTT*CACAAAAGTGCAGCTTGAAGTGTCAAAACTGCAAAGATGATGACTTATGTACTGGTCTT |
| CHAK00799 |
8 |
111 |
Confirmed |
Likely |
Rare |
Both |
Coding |
Lys |
Asn |
Nonsynonymous |
3 |
AAG |
AAC |
AC004381 |
G |
0.95 |
C |
0.05 |
GCACTGTGTGAGTGCTGGGGAACCAATTACCCCTGACGTGACTGAAAAATGGAGAAACAA*ACGGGCCTGGATATCTACGAAGGATATGGACAGACTGAAACGGTACCTGACCTCACTGAA |
| CHAK00800 |
9 |
101 |
Confirmed |
Likely |
Rare |
African |
Coding |
Phe |
Phe |
Synonymous |
3 |
TTC |
TTT |
AC004381 |
C |
0.95 |
T |
0.05 |
TGGAAATTTTAAGGGAATGAAAATTAAACCTGGCTCAATGGGAAAACCTTCTCCTGCTTT*GATGTTAAGGTTTGCACATCCCCTTCCAGGAGAATGTTTAACAACCCAATCTGTACACTA |
